PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G120600.4.p
Common NamePRUPE_ppa004154mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 503aa    MW: 54437.8 Da    PI: 7.0167
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G120600.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix591.2e-18147233186
            trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                         +W+++ + +L++a++++ ++l+rg+l++ +Weev++ +  r    ++s  qCk+k +nl+kryk ++++++++   s s++p+f+++e
  Prupe.7G120600.4.p 147 EWSDSAISCLLDAYTDKFTQLNRGNLRGRDWEEVAAIVseRCDRQRKSVDQCKNKVDNLKKRYKLERQRMNNG-GVSASHWPWFKKME 233
                         5*************************************544456677**********************9998.566679*******8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.0E-21145235No hitNo description
Gene3DG3DSA:3.40.1160.103.2E-61277495IPR001048Aspartate/glutamate/uridylate kinase
SuperFamilySSF536331.18E-47286495IPR001048Aspartate/glutamate/uridylate kinase
CDDcd042546.31E-108289495No hitNo description
PfamPF006967.1E-23290495IPR001048Aspartate/glutamate/uridylate kinase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006221Biological Processpyrimidine nucleotide biosynthetic process
GO:0046939Biological Processnucleotide phosphorylation
GO:0005737Cellular Componentcytoplasm
GO:0033862Molecular FunctionUMP kinase activity
Sequence ? help Back to Top
Protein Sequence    Length: 503 aa     Download sequence    Send to blast
MASCDDDFSI LGDESNTTHH SHLPHAPSSH QLHQPYAPPH RFATRTTPVH APPAQPILSD  60
KVNAVEDQAE AGDDYDDASA AAFCSNPFES GTDQNDVVAG ASEKRKEHSD ELSDGGGGGS  120
GSAPYSYKRS KPSSTAAIGE YRKDREEWSD SAISCLLDAY TDKFTQLNRG NLRGRDWEEV  180
AAIVSERCDR QRKSVDQCKN KVDNLKKRYK LERQRMNNGG VSASHWPWFK KMENIVGNSL  240
PGKAISDEDK GVSSPGTTPR QSKSRNAMAI ISPVSQMNKV KSAPSIKWRR VVFKISGAAL  300
AGAAPNNVDS KLAMLIAREV ALACHNGVEV AIVVGGRNFF CGDAWVTATG LDRSTAYQIG  360
MMATVMNSVL LQSALEKMGV QTRVQTAFSM QEVAEPYSRQ RAIRHLEKGR VVIFAGIGAG  420
TGNPLFSTDT AAALRALEIH AEAVLKGTNV DGVYDCNSQD NNFTFEHISF RDVVTRGATS  480
MDSMALTFCE ENRIPGISNS FG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ek6_F2e-532864957214Uridylate kinase
3ek6_E2e-532864957214Uridylate kinase
3ek6_D2e-532864957214Uridylate kinase
3ek6_C2e-532864957214Uridylate kinase
3ek6_B2e-532864957214Uridylate kinase
3ek6_A2e-532864957214Uridylate kinase
3ek5_F2e-532864957214Uridylate kinase
3ek5_E2e-532864957214Uridylate kinase
3ek5_D2e-532864957214Uridylate kinase
3ek5_C2e-532864957214Uridylate kinase
3ek5_B2e-532864957214Uridylate kinase
3ek5_A2e-532864957214Uridylate kinase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00340DAPTransfer from AT3G10030Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008241324.10.0PREDICTED: uncharacterized protein LOC103339757 isoform X1
TrEMBLM5WDK00.0M5WDK0_PRUPE; Uncharacterized protein
STRINGVIT_08s0007g04160.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10030.20.0Trihelix family protein